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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: ptpn-22 WBGene00021507

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Description

Tyrosine-protein phosphatase [Source:NCBI gene;Acc:176981]

Location

Chromosome IV: 1,727,930-1,740,262 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 3 transcripts (splice variants), 71 orthologues and 57 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y41D4A.5.3	2505	469aa	Y41D4A.5.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95Y26	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y41D4A.5.2	2192	469aa	Y41D4A.5.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95Y26	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y41D4A.5.1	2086	469aa	Y41D4A.5.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95Y26	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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