Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: Y55F3BR.2 WBGene00021939

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Location

Chromosome IV: 857,327-874,724 forward strand.

WBcel235:BX284604.4

About this gene

This gene has 4 transcripts (splice variants), 68 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y55F3BR.2a.2	4893	1549aa	Y55F3BR.2a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PMC3	NP_001294458	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	Y55F3BR.2a.1	4847	1549aa	Y55F3BR.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PMC3	NP_001294458	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	Y55F3BR.2b.1	4047	1256aa	Y55F3BR.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PRM5	NP_001294459	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	Y55F3BR.2c.1	2502	768aa	Y55F3BR.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PER8	NP_001294460

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Summary

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Gene-based displays