Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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DB built by WormBase

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Gene: F40F12.9 WBGene00043995

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Location

Chromosome III: 9,913,021-9,914,075 forward strand.

WBcel235:BX284603.4

About this gene

This gene has 6 transcripts (splice variants), 3 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F40F12.9b.1	480	91aa	F40F12.9b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5MCP4	NP_001255049	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	F40F12.9a.2	392	113aa	F40F12.9a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5MCP3	NP_001255048	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F40F12.9a.1	374	113aa	F40F12.9a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5MCP3	NP_001255048	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	F40F12.9c.2	344	15aa	F40F12.9c.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5MCP5	NP_001255050
-	F40F12.9c.1	326	15aa	F40F12.9c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5MCP5	NP_001255050
-	F40F12.9c.3	301	15aa	F40F12.9c.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5MCP5	NP_001255050

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Summary

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Gene-based displays