Transcript: C25A1.10a.1

Description

Nucleolar protein dao-5 [Source:NCBI gene;Acc:266845]

Location

About this transcript

This transcript has 5 exons and is annotated with 30 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C25A1.10a.1	3158	971aa	C25A1.10a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XVS4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	C25A1.10b.1	2091	696aa	C25A1.10b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XVS4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,158 bps, Translation length: 971 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9XVS4

Version

C25A1.10a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase