Transcript: T05G5.9a.1

Description

GRIP and coiled-coil domain-containing protein 2 [Source:NCBI gene;Acc:176378]

Location

About this transcript

This transcript has 10 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	T05G5.9a.1	2162	660aa	T05G5.9a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P34562	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	T05G5.9b.1	1978	658aa	T05G5.9b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P34562	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,162 bps, Translation length: 660 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P34562

Version

T05G5.9a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase