Transcript: Y43E12A.3c.1

Description

BTB domain-containing protein [Source:NCBI gene;Acc:177995]

Location

About this transcript

This transcript has 6 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y43E12A.3a.1	1130	316aa	Y43E12A.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O45927	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	Y43E12A.3c.1	906	301aa	Y43E12A.3c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	S6FWQ9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y43E12A.3b	959	No protein	-	A non-coding gene.ncRNA	-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 906 bps, Translation length: 301 residues

Version

Y43E12A.3c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase