Transcript: C55B7.6a.1

Description

STAS domain-containing protein [Source:NCBI gene;Acc:183842]

Location

About this transcript

This transcript has 11 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C55B7.6a.1	2270	729aa	C55B7.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EED0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C55B7.6b.1	2257	725aa	C55B7.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K5ATL0	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,270 bps, Translation length: 729 residues

Version

C55B7.6a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase