Transcript: F53B1.8b.1

Description

Solute carrier organic anion transporter family member [Source:NCBI gene;Acc:180528]

Location

About this transcript

This transcript has 10 exons and is annotated with 23 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F53B1.8a.1	3156	801aa	F53B1.8a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X5LPS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	F53B1.8b.1	2232	743aa	F53B1.8b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X5LX59	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,232 bps, Translation length: 743 residues

Version

F53B1.8b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase