Transcript: F54A5.3a.1

Description

SHC-transforming protein homolog 1 [Source:NCBI gene;Acc:3565745]

Location

About this transcript

This transcript has 6 exons and is annotated with 18 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F54A5.3a.1	1624	316aa	F54A5.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F54A5.3b.1	5250	227aa	F54A5.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	-	-
-	F54A5.3b.2	1750	227aa	F54A5.3b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	-	-
-	F54A5.3b.3	1407	227aa	F54A5.3b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	-	-
-	F54A5.3g	4585	No protein	-	A non-coding gene.ncRNA	-	-	-
-	F54A5.3c	1097	No protein	-	A non-coding gene.ncRNA	-	-	-
-	F54A5.3d	1087	No protein	-	A non-coding gene.ncRNA	-	-	-
-	F54A5.3f	947	No protein	-	A non-coding gene.ncRNA	-	-	-
-	F54A5.3e	811	No protein	-	A non-coding gene.ncRNA	-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,624 bps, Translation length: 316 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9TYT3

Version

F54A5.3a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase