Transcript: Y45G5AL.2b.1

Description

Neur_chan_LBD domain-containing protein [Source:NCBI gene;Acc:3896858]

Location

About this transcript

This transcript has 10 exons and is annotated with 18 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y45G5AL.2b.1	1197	398aa	Y45G5AL.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A168H3E7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	Y45G5AL.2a.1	1269	396aa	Y45G5AL.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4R170	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,197 bps, Translation length: 398 residues

Version

Y45G5AL.2b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase