Daphnia magna (Fresh water planktonic, NIES) (ASM2063170v1.1)

Daphnia magna (Fresh water planktonic, NIES) Assembly and Gene Annotation

About Daphnia magna

Daphnia magna is a small planktonic crustacean that belongs to the subclass Phyllopoda.

It inhabits a variety of freshwater environments and is broadly distributed throughout the northern hemisphere, and in South Africa.

D. magna is used in many different fields of research, such as ecotoxicology, population genetics, the evolution of sex, phenotypic plasticity, ecophysiology (including global change biology) and host-parasite interactions.

Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source)

Taxonomy ID 35525

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_020631705.2].

The total length of the assembly is 161467056 bp contained within 309 scaffolds. The scaffold N50 value is 12546303, the scaffold L50 value is 6. Assembly gaps span 12400 bp.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyASM2063170v1.1, INSDC Assembly GCA_020631705.2,
Database version111.1
Golden Path Length161,467,056
Genebuild byNCBI
Genebuild methodImport
Data sourceSungkyunkwan University

Gene counts

Coding genes16,891
Non coding genes9,241
Small non coding genes4,557
Long non coding genes4,581
Misc non coding genes103
Pseudogenes2,203
Gene transcripts47,831