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Summary
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DB built by FlyBase

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Gene: Ldh FBgn0001258

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Description

Lactate dehydrogenase

Gene Synonyms

Location

Primary_assembly 3L: 6,259,105-6,262,694 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 48 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
Ldh-RB	FBtr0332065	1778	332aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJQ0 Q95028	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ldh-RA	FBtr0077008	1391	332aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJQ0 Q95028	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ldh-RD	FBtr0332067	1350	332aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJQ0 Q95028	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ldh-RC	FBtr0332066	1324	332aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJQ0 Q32KE6 Q95028	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree

Orthologues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data