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DB built by FlyBase

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Gene: CG17163 FBgn0039942

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Location

Primary_assembly X: 23,080,759-23,082,709 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 2 transcripts (splice variants) and 8 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
CG17163-RA	FBtr0113727	1716	124aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W5Q2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG17163-RB	FBtr0309316	1451	123aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	N1NVF4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Splice variants

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