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DB built by FlyBase

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Gene: Fas3 FBgn0000636

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Description

Fasciclin 3

Gene Synonyms

Location

Primary_assembly 2L: 18,320,102-18,393,441 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 7 transcripts (splice variants) and 36 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Fas3-RD	FBtr0112805	4084	577aa	FBpp0111717	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ14	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Fas3-RA	FBtr0081051	3336	508aa	FBpp0080604	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P15278	-	-
Fas3-RG	FBtr0344782	3265	557aa	FBpp0311111	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JAT7	-	-
Fas3-RB	FBtr0081052	2952	401aa	FBpp0080605	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J6N7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Fas3-RC	FBtr0112804	2671	475aa	FBpp0111716	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INX7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Fas3-RE	FBtr0301391	2567	577aa	FBpp0290605	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2RVH3 A8DZ14 Q6IH77	-	-
Fas3-RF	FBtr0340580	2422	401aa	FBpp0309467	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J6N7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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