Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: upd1 FBgn0004956

Description

unpaired 1

Gene Synonyms

Location

Primary_assembly X: 18,305,354-18,309,291 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 38 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
upd1-RA	FBtr0074581	2642	413aa	FBpp0074353	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWW4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
upd1-RC	FBtr0343592	2602	413aa	FBpp0310189	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J9H2 F6J9H5 F6J9I0 F6J9I2 O96525 Q9VWW4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
upd1-RB	FBtr0112847	2443	413aa	FBpp0111760	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWW4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

EMBL-EBI User Survey 2024

Gene: upd1 FBgn0004956

Summary

About Us

Get help

Our sister sites

Follow us

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Gene: upd1 FBgn0004956

Summary

About Us

Get help

Our sister sites

Follow us