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Summary
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DB built by FlyBase

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Gene: Xbp1 FBgn0021872

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Description

X box binding protein-1

Gene Synonyms

Location

Primary_assembly 2R: 21,143,545-21,145,750 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 10 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Xbp1-RE	FBtr0310045	2119	498aa	FBpp0301746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MLW7 Q95TE7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Xbp1-RD	FBtr0310044	2138	307aa	FBpp0301745	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BI44	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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