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DB built by FlyBase

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Gene: Pka-R2 FBgn0022382

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Description

Protein kinase, cAMP-dependent, regulatory subunit type 2

Gene Synonyms

Location

Primary_assembly 2R: 9,993,890-10,026,042 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 93 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pka-R2-RB	FBtr0088438	4108	377aa	FBpp0087524	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P81900	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pka-R2-RA	FBtr0088437	2157	377aa	FBpp0087523	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P81900	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Pka-R2-RE	FBtr0112902	2102	376aa	FBpp0111815	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
Pka-R2-RD	FBtr0112901	1614	373aa	FBpp0111814	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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