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DB built by FlyBase

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Gene: TBPH FBgn0025790

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Description

TAR DNA-binding protein-43 homolog

Gene Synonyms

Location

Primary_assembly 2R: 23,859,067-23,862,593 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 6 transcripts (splice variants), 99 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
TBPH-RC	FBtr0089625	3222	531aa	FBpp0088568	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXP8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
TBPH-RE	FBtr0301643	2159	531aa	FBpp0290857	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXP8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
TBPH-RD	FBtr0089627	2156	531aa	FBpp0088570	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXP8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
TBPH-RF	FBtr0301644	1930	531aa	FBpp0290858	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O97468 Q8SXP8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
TBPH-RB	FBtr0089624	1927	531aa	FBpp0088567	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXP8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
TBPH-RA	FBtr0089626	1686	332aa	FBpp0088569	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O97469 Q9W1I0	-	-

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Summary

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