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DB built by FlyBase

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Gene: Vap33 FBgn0029687

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Description

VAMP-associated protein 33kDa

Gene Synonyms

Location

Primary_assembly X: 3,948,975-3,955,442 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 24 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Vap33-RE	FBtr0342739	3897	269aa	FBpp0309607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4N8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Vap33-RC	FBtr0070618	3607	269aa	FBpp0089170	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4N8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Vap33-RB	FBtr0070616	2541	269aa	FBpp0070589	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YI35 Q9W4N8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Vap33-RA	FBtr0070617	2439	235aa	FBpp0089169	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVX5	-	-

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Summary

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