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DB built by FlyBase

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Gene: CG2861 FBgn0029728

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Gene Synonyms

Location

Primary_assembly X: 4,797,231-4,804,862 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 6 transcripts (splice variants) and 10 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG2861-RA	FBtr0070731	5992	1893aa	FBpp0070699	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4G6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG2861-RE	FBtr0332313	5967	1873aa	FBpp0304592	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDT1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG2861-RD	FBtr0332312	5932	1873aa	FBpp0304591	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PJ39 Q8IRS2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG2861-RG	FBtr0481623	5861	1796aa	FBpp0428405	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRS2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG2861-RF	FBtr0481622	5801	1776aa	FBpp0428404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YIE7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG2861-RH	FBtr0481624	5744	1757aa	FBpp0428406	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YID8 A9YID9 A9YIE0 A9YIE2 A9YIE8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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