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DB built by FlyBase

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Gene: Usp16-45 FBgn0029763

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Description

Ubiquitin specific protease 16/45

Gene Synonyms

Location

Primary_assembly X: 5,421,533-5,427,219 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 101 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Usp16-45-RF	FBtr0340462	4454	1126aa	FBpp0309404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4C3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Usp16-45-RA	FBtr0070773	4141	1126aa	FBpp0070739	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Usp16-45-RD	FBtr0070772	4117	1126aa	FBpp0070738	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Usp16-45-RE	FBtr0340461	4093	1126aa	FBpp0309403	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Usp16-45-RB	FBtr0070775	4066	1126aa	FBpp0070741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W4C3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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