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DB built by FlyBase

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Gene: jub FBgn0030530

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Description

Ajuba LIM protein

Gene Synonyms

Location

Primary_assembly X: 13,826,041-13,830,317 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 70 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
jub-RB	FBtr0073834	2634	728aa	FBpp0073665	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VY77	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
jub-RE	FBtr0340292	2893	718aa	FBpp0309253	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSC9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
jub-RD	FBtr0303419	2619	723aa	FBpp0292480	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSA2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
jub-RC	FBtr0303418	2604	718aa	FBpp0292479	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSC9 M9ZYW5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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