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DB built by FlyBase

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Gene: Graf FBgn0030685

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Description

GTPase regulator associated with FAK

Gene Synonyms

Location

Primary_assembly X: 15,751,674-15,760,733 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 7 transcripts (splice variants) and 83 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Graf-RG	FBtr0340305	4389	1025aa	FBpp0309266	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JDY8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Graf-RD	FBtr0074197	4362	1016aa	FBpp0089212	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXQ2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Graf-RI	FBtr0340307	4331	1025aa	FBpp0309268	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JDY8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Graf-RE	FBtr0074198	4304	1016aa	FBpp0089213	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXQ2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Graf-RH	FBtr0340306	4104	1025aa	FBpp0309267	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JDY8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Graf-RA	FBtr0074194	4077	1016aa	FBpp0073979	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXQ2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Graf-RJ	FBtr0345133	3987	1016aa	FBpp0311354	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXQ2	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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