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DB built by FlyBase

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Gene: OtopLb FBgn0031514

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Description

Otopetrin-like b

Gene Synonyms

Location

Primary_assembly 2L: 3,275,800-3,280,534 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 15 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
OtopLb-RA	FBtr0077609	2656	797aa	FBpp0077296	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQN3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
OtopLb-RC	FBtr0340589	2653	796aa	FBpp0309470	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JD17	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
OtopLb-RB	FBtr0077608	2216	629aa	FBpp0077295	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQ02	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
OtopLb-RD	FBtr0344796	2206	647aa	FBpp0311124	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J8I0	-	-

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Summary

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