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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: TpnC25D FBgn0031692

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Description

Troponin C at 25D

Gene Synonyms

Location

Primary_assembly 2L: 5,216,701-5,219,053 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 233 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
TpnC25D-RC	FBtr0346458	1107	149aa	FBpp0312108	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMT2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
TpnC25D-RB	FBtr0342931	688	143aa	FBpp0309713	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JD70	-	-
TpnC25D-RA	FBtr0079063	645	149aa	FBpp0078699	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMT2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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