Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
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Pathway
Molecular interactions
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ID History
- Gene history

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DB built by FlyBase

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Gene: CG13284 FBgn0032614

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Gene Synonyms

Location

Primary_assembly 2L: 16,842,300-16,848,716 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 5 transcripts (splice variants), 286 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG13284-RD	FBtr0332334	2178	339aa	FBpp0304611	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGQ3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG13284-RE	FBtr0345747	2109	325aa	FBpp0311768	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BQ3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG13284-RC	FBtr0332333	1676	338aa	FBpp0304610	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5SHN1	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG13284-RB	FBtr0080927	1316	339aa	FBpp0080481	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGQ3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG13284-RA	FBtr0080926	1200	325aa	FBpp0080480	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BQ3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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