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DB built by FlyBase

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Gene: nrv3 FBgn0032946

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Description

nervana 3

Gene Synonyms

Location

Primary_assembly 2L: 21,380,000-21,393,319 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 111 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nrv3-RE	FBtr0333355	4637	313aa	FBpp0305547	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDX8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
nrv3-RD	FBtr0081520	4514	311aa	FBpp0081048	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JS69 Q86NM2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
nrv3-RC	FBtr0081519	1675	311aa	FBpp0081047	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JS69	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
nrv3-RA	FBtr0081518	1519	311aa	FBpp0081046	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JS69	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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