Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: puml FBgn0033226

.

Description

pummelig

Gene Synonyms

Location

Primary_assembly 2R: 7,812,504-7,815,486 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 7 transcripts (splice variants), 92 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
puml-RG	FBtr0345697	2695	454aa	FBpp0311746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U191	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
puml-RA	FBtr0088834	1954	454aa	FBpp0087910	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U191	-	-
puml-RF	FBtr0339120	1756	454aa	FBpp0308265	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U191	-	-
puml-RD	FBtr0088836	1694	387aa	FBpp0087912	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JQU9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
puml-RE	FBtr0339119	1668	387aa	FBpp0308264	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JQU9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
puml-RC	FBtr0088835	1653	387aa	FBpp0087911	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JQU9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
puml-RB	FBtr0088837	1458	387aa	FBpp0087913	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JQU9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.