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DB built by FlyBase

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Gene: CG2269 FBgn0033484

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Location

Primary_assembly 2R: 10,085,169-10,096,416 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 9 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG2269-RD	FBtr0305653	3834	783aa	FBpp0296933	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z847 Q86NV0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG2269-RB	FBtr0088409	3783	783aa	FBpp0087497	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z847	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG2269-RC	FBtr0088407	3543	703aa	FBpp0087495	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E9D9	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG2269-RA	FBtr0088408	3379	703aa	FBpp0087496	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E9D9 Q8IGF6	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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