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Summary
- Splice variants
- Transcript comparison
- Gene alleles
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DB built by FlyBase

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Gene: CG15023 FBgn0035548

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Gene Synonyms

Location

Primary_assembly 3L: 4,460,622-4,461,504 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 26 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG15023-RD	FBtr0346535	819	169aa	FBpp0312153	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZB8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG15023-RB	FBtr0290225	686	169aa	FBpp0288664	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZB8	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG15023-RC	FBtr0331409	683	168aa	FBpp0303826	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHE4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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