Summary
- Splice variants
- Transcript comparison
- Gene alleles
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- Gene tree (Drosophilidae)
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Pan-taxonomic Compara
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- GO: Molecular function
- GO: Cellular component
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DB built by FlyBase

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Gene: Usp32 FBgn0036913

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Description

Ubiquitin specific protease 32

Gene Synonyms

Location

Primary_assembly 3L: 19,871,139-19,881,783 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 625 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
Usp32-RF	FBtr0479916	6311	1779aa	FBpp0428248	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1PGG1 M9PD06	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Usp32-RI	FBtr0479919	6302	1776aa	FBpp0428251	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Usp32-RG	FBtr0479917	6254	1760aa	FBpp0428249	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1PGE3 B1PGE5 B1PGE6 B1PGE7 B1PGF1 B1PGF2 B1PGF7 B1PGF8 B1PGG9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Usp32-RH	FBtr0479918	6245	1757aa	FBpp0428250	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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