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DB built by FlyBase

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Gene: beta-Man FBgn0037215

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Description

beta-Mannosidase

Gene Synonyms

Location

Primary_assembly 3R: 4,197,206-4,204,572 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants), 99 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
beta-Man-RA	FBtr0078964	3035	908aa	FBpp0078603	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMY5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
beta-Man-RF	FBtr0336702	3100	778aa	FBpp0307683	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KIE6	-	-
beta-Man-RG	FBtr0336703	3073	778aa	FBpp0307684	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHB8 B3DMR2 Q0KIE6	-	-
beta-Man-RH	FBtr0336704	3029	906aa	FBpp0307685	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGF7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
beta-Man-RD	FBtr0306022	2922	908aa	FBpp0297164	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BI66 Q8IGB2 Q95TA1 Q9VMY5	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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