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DB built by FlyBase

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Gene: CG7381 FBgn0038098

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Location

Primary_assembly 3R: 12,967,775-12,977,471 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 5 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG7381-RA	FBtr0082727	2606	712aa	FBpp0082195	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGX5 Q8IGX9 Q9VG15	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG7381-RD	FBtr0301219	3098	625aa	FBpp0290437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSQ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG7381-RE	FBtr0331428	2948	625aa	FBpp0303845	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSQ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG7381-RB	FBtr0082726	2913	625aa	FBpp0082194	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSQ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG7381-RF	FBtr0331429	2603	711aa	FBpp0303846	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFS1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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