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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene tree (Metazoa)
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- Gene tree (Insects)
- Gene tree (Drosophilidae)
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DB built by FlyBase

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Gene: CG4960 FBgn0039371

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Location

Primary_assembly 3R: 25,786,329-25,787,298 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 55 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG4960-RB	FBtr0346108	970	174aa	FBpp0311937	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T8S3 Q9VBM3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG4960-RA	FBtr0084919	765	174aa	FBpp0084293	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VBM3	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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