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DB built by FlyBase

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Gene: Jafrac1 FBgn0040309

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Description

thioredoxin peroxidase 1

Gene Synonyms

Location

Primary_assembly X: 13,329,824-13,331,994 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 65 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Jafrac1-RD	FBtr0339700	1080	194aa	FBpp0308757	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Jafrac1-RC	FBtr0339699	1051	194aa	FBpp0308756	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Jafrac1-RB	FBtr0073763	1014	194aa	FBpp0073594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Jafrac1-RA	FBtr0073764	1010	194aa	FBpp0073595	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3P0 X2JF59	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Jafrac1-RE	FBtr0345161	976	194aa	FBpp0311371	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6J6B9 Q9V3P0 X2JF59	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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