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DB built by FlyBase

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Gene: dpr6 FBgn0040823

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Description

defective proboscis extension response 6

Gene Synonyms

Location

Primary_assembly 3L: 9,974,651-10,139,360 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 5 transcripts (splice variants), 78 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
dpr6-RF	FBtr0344949	5227	396aa	FBpp0311219	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J8X8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dpr6-RC	FBtr0331536	3326	390aa	FBpp0303926	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC40	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
dpr6-RE	FBtr0332666	2967	283aa	FBpp0304912	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF70	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dpr6-RD	FBtr0332665	2763	286aa	FBpp0304911	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PES4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
dpr6-RA	FBtr0076353	2741	283aa	FBpp0076082	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VT76	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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