Summary
- Splice variants
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Metazoan Compara
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DB built by FlyBase

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Gene: vig2 FBgn0046214

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Description

vig2

Gene Synonyms

Location

Primary_assembly 3R: 25,123,373-25,125,619 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 54 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
vig2-RB	FBtr0084775	1500	443aa	FBpp0084150	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RIY3 Q9VBX3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
vig2-RC	FBtr0084776	1701	412aa	FBpp0084151	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960D3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
vig2-RD	FBtr0113354	1553	412aa	FBpp0112266	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960D3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
vig2-RA	FBtr0084777	1549	412aa	FBpp0084152	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960D3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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