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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
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- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- Variant table
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DB built by FlyBase

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Gene: CG30495 FBgn0050495

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Location

Primary_assembly 2R: 7,656,895-7,659,061 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 140 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG30495-RB	FBtr0336998	1939	331aa	FBpp0307928	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFB3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG30495-RA	FBtr0088920	1355	327aa	FBpp0087994	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z726 Q4QQ95	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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