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Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: CG33017 FBgn0053017

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Location

Primary_assembly 2R: 16,272,114-16,277,655 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 11 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG33017-RD	FBtr0345872	5479	1630aa	FBpp0311811	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZAC8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG33017-RB	FBtr0087135	5159	1630aa	FBpp0086279	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZAC8 Q8T445	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG33017-RC	FBtr0344885	5106	1388aa	FBpp0311197	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGM7 B9EQZ4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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