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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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DB built by FlyBase

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Gene: CG41434 FBgn0084001

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Location

Primary_assembly 2L: 22,037,860-22,039,772 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 2 transcripts (splice variants) and 39 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG41434-RC	FBtr0332200	1838	411aa	FBpp0304509	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDY1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG41434-RB	FBtr0332199	1249	394aa	FBpp0304508	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8M7	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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