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DB built by FlyBase

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Gene: Pbp49 FBgn0260398

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Description

PSEA-binding protein 49kD

Gene Synonyms

Location

Primary_assembly 2R: 8,129,354-8,131,323 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants) and 86 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pbp49-RA	FBtr0300658	1970	377aa	FBpp0289882	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JUY8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Pbp49-RD	FBtr0339298	1913	358aa	FBpp0308407	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHH3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pbp49-RB	FBtr0300659	1887	377aa	FBpp0289883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JUY8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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