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DB built by FlyBase

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Gene: elav FBgn0260400

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Description

embryonic lethal abnormal vision

Gene Synonyms

Location

Primary_assembly X: 509,235-523,226 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 64 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
elav-RD	FBtr0307173	10506	483aa	FBpp0298002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NFP7 P16914	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
elav-RB	FBtr0100254	2602	479aa	FBpp0099643	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
elav-RA	FBtr0070091	2505	483aa	FBpp0070086	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NFP7 P16914	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
elav-RC	FBtr0114366	2248	479aa	FBpp0112915	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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