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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
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- Paralogues
Pan-taxonomic Compara
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- Orthologues
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DB built by FlyBase

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Gene: CG42594 FBgn0260971

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Location

Primary_assembly X: 4,840,833-4,906,575 forward strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 103 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42594-RC	FBtr0345703	4812	1039aa	FBpp0311747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJG7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG42594-RD	FBtr0345704	5127	905aa	FBpp0311748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJG8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42594-RA	FBtr0301749	4812	905aa	FBpp0290963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJG8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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