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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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- Gene tree (Drosophilidae)
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- GO: Anatomical entity
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DB built by FlyBase

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Gene: CG42662 FBgn0261538

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Location

Primary_assembly 2R: 15,698,726-15,701,696 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 17 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42662-RB	FBtr0302555	2791	45aa	FBpp0291711	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD61	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42662-RC	FBtr0302556	1695	45aa	FBpp0291712	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD61	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42662-RA	FBtr0302554	1100	45aa	FBpp0291710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD61	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42662-RD	FBtr0309868	500	45aa	FBpp0301602	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD61	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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