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Summary
- Splice variants
- Transcript comparison
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Sequence
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DB built by FlyBase

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Gene: CG42724 FBgn0261641

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Location

Primary_assembly 3R: 6,361,672-6,368,288 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 7 transcripts (splice variants) and 66 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42724-RC	FBtr0303013	3688	1123aa	FBpp0292135	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFB8 C0PVA6 Q95U01	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42724-RM	FBtr0345076	5245	761aa	FBpp0311306	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGR1	-	-
CG42724-RL	FBtr0345075	4153	763aa	FBpp0311305	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI14	-	-
CG42724-RI	FBtr0303017	4036	763aa	FBpp0292139	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI14	-	-
CG42724-RK	FBtr0334545	3589	1123aa	FBpp0306612	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFB8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42724-RG	FBtr0303015	2805	669aa	FBpp0292137	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NN86	-	-
CG42724-RE	FBtr0303014	2500	763aa	FBpp0292136	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VI14	-	-

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Summary

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