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DB built by FlyBase

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Gene: pico FBgn0261811

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Description

pico

Gene Synonyms

Location

Primary_assembly X: 19,830,215-19,852,059 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 83 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pico-RA	FBtr0074804	6183	1162aa	FBpp0074573	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWB7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
pico-RB	FBtr0074805	6790	1034aa	FBpp0074574	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQW0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
pico-RD	FBtr0303996	5135	1034aa	FBpp0292965	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV71 Q8IQW0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
pico-RC	FBtr0303995	5095	1113aa	FBpp0292964	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MSQ5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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