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DB built by FlyBase

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Gene: mub FBgn0262737

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Description

mushroom-body expressed

Gene Synonyms

Location

Primary_assembly 3L: 21,844,788-21,932,702 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 12 transcripts (splice variants), 77 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
mub-RK	FBtr0304984	3489	573aa	FBpp0293521	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEH9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
mub-RD	FBtr0111017	11975	539aa	FBpp0110316	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8A7	-	-
mub-RN	FBtr0346820	9527	415aa	FBpp0312395	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0WH03	-	-
mub-RM	FBtr0333222	9471	359aa	FBpp0305424	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V2A4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
mub-RC	FBtr0078470	9374	364aa	FBpp0089422	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95SZ9	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
mub-RH	FBtr0304982	3690	433aa	FBpp0293519	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NGB9	-	-
mub-RF	FBtr0304980	3553	557aa	FBpp0293517	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEH1 A4IJ59	-	-
mub-RG	FBtr0304981	3468	359aa	FBpp0293518	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V2A4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
mub-RE	FBtr0301364	3441	557aa	FBpp0290578	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IJ59	-	-
mub-RA	FBtr0078468	3437	386aa	FBpp0078122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91632	-	-
mub-RI	FBtr0304983	3387	539aa	FBpp0293520	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDY6	-	-
mub-RL	FBtr0332736	2968	368aa	FBpp0304982	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PIK1	-	-

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Summary

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