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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: Ptr FBgn0262867

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Description

Patched-related

Gene Synonyms

Location

Primary_assembly 2R: 6,181,748-6,196,320 reverse strand.

BDGP6.46:AE013599.5

About this gene

This gene has 5 transcripts (splice variants), 192 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ptr-RC	FBtr0307501	4941	1169aa	FBpp0298836	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86P36	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ptr-RB	FBtr0307500	4885	1169aa	FBpp0298835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86P36	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ptr-RA	FBtr0086003	4630	1169aa	FBpp0085347	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86P36	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ptr-RE	FBtr0336524	1650	94aa	FBpp0307594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEC6	-	-
Ptr-RD	FBtr0336523	1385	94aa	FBpp0307593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KED8	-	-

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Summary

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