Patronin
Primary_assembly 2R: 17,519,024-17,535,866 reverse strand.
BDGP6.46:AE013599.5
This gene has 13 transcripts (splice variants) and 81 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Patronin-RI | FBtr0332260 | 6195 | 1689aa | FBpp0304550 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KEY4 H6WS59 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RD | FBtr0273446 | 6782 | 1663aa | FBpp0271954 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZJ1 Q8T0T0 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RO | FBtr0332266 | 6177 | 1683aa | FBpp0304556 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JH91 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RK | FBtr0332262 | 6168 | 1680aa | FBpp0304552 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KFA4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RJ | FBtr0332261 | 6150 | 1674aa | FBpp0304551 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KET5 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| Patronin-RF | FBtr0300603 | 6141 | 1671aa | FBpp0289830 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JH90 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RN | FBtr0332265 | 6110 | 1439aa | FBpp0304555 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KEY6 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RC | FBtr0086950 | 6018 | 1630aa | FBpp0086106 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A1ZAU8 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RE | FBtr0273447 | 5925 | 1599aa | FBpp0271955 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7YZJ2 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RL | FBtr0332263 | 5742 | 1538aa | FBpp0304553 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KG58 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RM | FBtr0332264 | 5640 | 1504aa | FBpp0304554 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KFU3 A0A0U3DWR7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RA | FBtr0086948 | 5507 | 1517aa | FBpp0086104 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Patronin-RB | FBtr0086949 | 5163 | 1540aa | FBpp0086105 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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