Summary
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DB built by FlyBase

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Gene: Cngl FBgn0263257

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Description

Cyclic nucleotide-gated ion channel-like

Gene Synonyms

Location

Primary_assembly X: 15,386,038-15,441,252 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 6 transcripts (splice variants), 83 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Cngl-RE	FBtr0308309	11745	1970aa	FBpp0300628	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEI3 Q9U5E2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Cngl-RJ	FBtr0345072	11745	1970aa	FBpp0311302	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXV8	-	-
Cngl-RD	FBtr0308308	11700	1955aa	FBpp0300627	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NGG3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Cngl-RI	FBtr0345071	11134	1942aa	FBpp0311301	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PH69	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Cngl-RK	FBtr0474149	11134	1945aa	FBpp0423148	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A499NPJ3	-	-
Cngl-RF	FBtr0308310	5515	319aa	FBpp0300629	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXV7	-	-

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Summary

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